Workflows

Design plasmids encoding predicted pathways by using the BASIC assembly method.

Given one or a collection of heterolgous pathways in SBML files, generate the SBOL for the constructs and the assembly protocols to build them

Given a collection of SBML files with the heterologous pathways, calculate the FBA and the Gibbs free energy of the pathways.

Perform retrosynthesis using RetroPath2.0 and convert the heterologous pathways to SBML files

Galaxy workflow that predicts heterologous pathways for the production of a compound of interest in an organism of interest